Patrick Charbonneau

Patrick Charbonneau

Associate Professor of Chemistry

Associate Professor of Physics (Secondary)

Office Location: 
5329 French Science, 124 Science Drive, Durham, NC 27708
Front Office Address: 
Box 90347, Durham, NC 27708-0347
Phone: 
(919) 613-6261

Overview

Professor Charbonneau studies soft matter. His work combines theory and simulation to understand the glass problem, protein crystallization, microphase formation, and colloidal assembly in external fields.

Education & Training

  • Ph.D., Harvard University 2006

  • B.S., McGill University (Canada) 2001

Selected Grants

Cracking the Glass Problem awarded by University of Chicago (Principal Investigator). 2016 to 2023

Bioinformatics and Computational Biology Training Program awarded by National Institutes of Health (Mentor). 2005 to 2021

Soft Matter Simulation and Theory of the Crystal Assembly of Globular and Membrane Proteins awarded by National Science Foundation (Principal Investigator). 2018 to 2021

GAANN - Department of Chemistry awarded by Department of Education (Mentor). 2015 to 2019

CAREER: Soft Matter Self-Assembly: Protein Crystallization and Collodial Microphase Formation awarded by National Science Foundation (Principal Investigator). 2011 to 2016

Structural Biology and Biophysics Training Program awarded by National Institutes of Health (Mentor). 1994 to 2015

Charbonneau, P., and J. Kundu. “Postponing the dynamical transition density using competing interactions.” Granular Matter, vol. 22, no. 3, Aug. 2020. Scopus, doi:10.1007/s10035-020-0998-z. Full Text

Berthier, Ludovic, et al. “Gardner physics in amorphous solids and beyond.The Journal of Chemical Physics, vol. 151, no. 1, July 2019, p. 010901. Epmc, doi:10.1063/1.5097175. Full Text

Charbonneau, Patrick, et al. “Morphology of renormalization-group flow for the de Almeida-Thouless-Gardner universality class.Physical Review. E, vol. 99, no. 2–1, Feb. 2019, p. 022132. Epmc, doi:10.1103/physreve.99.022132. Full Text Open Access Copy

Biroli, Giulio, et al. “Dynamics around the site percolation threshold on high-dimensional hypercubic lattices.Physical Review. E, vol. 99, no. 2–1, Feb. 2019, p. 022118. Epmc, doi:10.1103/physreve.99.022118. Full Text Open Access Copy

Altan, Irem, and Patrick Charbonneau. “Correction to: Obtaining Soft Matter Models of Proteins and their Phase Behavior.Methods in Molecular Biology (Clifton, N.J.), vol. 2039, Jan. 2019, p. C1. Epmc, doi:10.1007/978-1-4939-9678-0_18. Full Text

Altan, Irem, and Patrick Charbonneau. “Obtaining Soft Matter Models of Proteins and their Phase Behavior.Methods in Molecular Biology (Clifton, N.J.), vol. 2039, Jan. 2019, pp. 209–28. Epmc, doi:10.1007/978-1-4939-9678-0_15. Full Text

Hu, Y., et al. “Correlation lengths in quasi-one-dimensional systems via transfer matrices.” Molecular Physics, vol. 116, no. 21–22, Nov. 2018, pp. 3345–54. Scopus, doi:10.1080/00268976.2018.1479543. Full Text Open Access Copy

Norman, James, et al. “Tissue self-organization underlies morphogenesis of the notochord.Philos Trans R Soc Lond B Biol Sci, vol. 373, no. 1759, Sept. 2018. Pubmed, doi:10.1098/rstb.2017.0320. Full Text

Reyes, C., et al. “The Limits of Primary Radiation Forces in Bulk Acoustic Standing Waves for Concentrating Nanoparticles.” Particle and Particle Systems Characterization, vol. 35, no. 7, July 2018. Scopus, doi:10.1002/ppsc.201700470. Full Text

Hu, Yi, and Patrick Charbonneau. “Clustering and assembly dynamics of a one-dimensional microphase former.Soft Matter, vol. 14, no. 20, May 2018, pp. 4101–09. Epmc, doi:10.1039/c8sm00315g. Full Text Open Access Copy

Pages

Kundu, Joyjit, et al. “Bypassing glassy sluggishness by particle swap Monte Carlo in high dimensions.” Abstracts of Papers of the American Chemical Society, vol. 257, AMER CHEMICAL SOC, 2019.

Williams, Shawn, et al. “Pre-competitive collaborations and co-operation for structural biology.” Abstracts of Papers of the American Chemical Society, vol. 254, AMER CHEMICAL SOC, 2017.

Charbonneau, Patrick. “Gardner transition: A new lens for glasses.” Abstracts of Papers of the American Chemical Society, vol. 254, AMER CHEMICAL SOC, 2017.

Shields, Wyatt, et al. “Acoustic radiation forces for the rapid and programmable assembly of microparticles and nanoparticles.” Abstracts of Papers of the American Chemical Society, vol. 251, AMER CHEMICAL SOC, 2016.

Yellen, Benjamin, et al. “Magnetically directed assembly and dynamic manipulation of binary colloidal crystals.” Abstracts of Papers of the American Chemical Society, vol. 245, AMER CHEMICAL SOC, 2013.

Barnum, Timothy J., et al. “Microscopic understanding of protein crystallization by large-scale analysis of experimental conditions.” Abstracts of Papers of the American Chemical Society, vol. 245, AMER CHEMICAL SOC, 2013.

Zhang, Kai, and Patrick Charbonneau. “Monte Carlo algorithms for studying microphase and cluster-crystal formers.” Abstracts of Papers of the American Chemical Society, vol. 243, AMER CHEMICAL SOC, 2012.

Fusco, Diana, and Patrick Charbonneau. “Why Proteins Crystallize (or not): The Role of Non Specific Protein Interactions.” Biophysical Journal, vol. 102, no. 3, Elsevier BV, 2012, pp. 268a-269a. Crossref, doi:10.1016/j.bpj.2011.11.1478. Full Text

Zhang, Kai, and Patrick Charbonneau. “Monte Carlo study of the axial next-nearest-neighbor Ising model and other microphase forming systems.” Abstracts of Papers of the American Chemical Society, vol. 240, AMER CHEMICAL SOC, 2010.

Charbonneau, Patrick, et al. Data from: Finite-dimensional vestige of spinodal criticality above the dynamical glass transition. 5 Aug. 2020. Manual, doi:10.7924/r4jh3m094. Full Text

Berthier, Ludovic, et al. Data from: Front-mediated melting of isotropic ultrastable glasses. 8 Oct. 2019. Crossref, doi:10.7924/r4542pd2c. Full Text

Charbonneau, Patrick, et al. Data and scripts from: Zero-temperature glass transition in two dimensions. 26 Feb. 2019. Manual, doi:10.7924/r46w9b248. Full Text

Kundu, Joyjit, et al. Data and scripts from: Bypassing sluggishness: SWAP algorithm and glassiness in high dimensions. 22 Feb. 2019. Manual, doi:10.7924/r49w0dr6j. Full Text

Charbonneau, Patrick, et al. Data and scripts from: Glassy, Gardner-like phenomenology in minimally polydisperse crystalline systems. 5 Feb. 2019. Manual, doi:10.7924/r4k93500n. Full Text

Altan, Irem, and Patrick Charbonneau. Data and scripts from: Obtaining soft matter models of proteins and their phase behavior. 4 Feb. 2019. Manual, doi:10.7924/r4ww7bs1p. Full Text

Pages